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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12226693_12233123_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12226693 - 12233123

Intron Length:

6431

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATCAA

U12 Branch Point Sequence:

TGATACACAAAT

Flanking Amino Acid:

LQTKTGSITVDSSDGSLKAS

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

81.8

38.5

Major BPS

62.4

0.31

32.1

Major PPT

0.97

0.5

16.2

Minor 5ss

38.8

-1.3

3.4

58.1

46.5

Minor BPS

45.3

-0.2

66.25

42.9

Associated Gene:

Gene:

FAM185A

Ensembl Gene ID:

ENSAPLG00000027009

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041273

12196202 - 12244457

48256