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Intron Name: Anas_platyrhynchos_platyrhynchos_1_122338933_122342656_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

122338933 - 122342656

Intron Length:

3724

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTG|GCAGGGGAG

5'SS Class:

major

3'SS Sequence:

AAAGCTTTTAAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

AATTGATTAAAT

Flanking Amino Acid:

VRAPLTPLTDCTCYFQLICT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.59

1.1

60.4

41.8

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

58.3

0.19

1.2

56.3

42.7

Minor 5ss

-3.8

4.1

39.1

Minor BPS

51.9

0.14

2.1

74.59

41.3

Associated Gene:

Gene:

NDP

Ensembl Gene ID:

ENSAPLG00000030151

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040258

122338794 - 122342862

4069