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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12235442_12244051_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12235442 - 12244051

Intron Length:

8610

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAA

U12 Branch Point Sequence:

CTAAACAGAACT

Flanking Amino Acid:

ASKDDHVTLSGHMNQSNEAD

Intron Amino Acid Position:

319

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

75.2

40.6

Major BPS

68.7

0.47

0.9

67.9

Major PPT

87.2

0.84

0.7

79.8

32.2

Minor 5ss

36.8

-1.5

3.5

53.4

44.8

Minor BPS

45.8

-0.2

1.9

65.18

44.1

Associated Gene:

Gene:

FAM185A

Ensembl Gene ID:

ENSAPLG00000027009

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041273

12196202 - 12244457

48256