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Intron Name: Anas_platyrhynchos_platyrhynchos_1_122422594_122429769_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

122422594 - 122429769

Intron Length:

7176

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGT|GTAAGTTAA

5'SS Class:

major

3'SS Sequence:

ATGTTCTGCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTAACCATGAGT

Flanking Amino Acid:

ADDLLEAVLTVFEDDNKQVE

Intron Amino Acid Position:

685

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.1

73.2

Major BPS

100

1.24

0.5

100

Major PPT

67.4

0.39

66.4

40.1

Minor 5ss

41.5

-0.9

2.8

49.9

46.4

Minor BPS

50.3

0.09

74.07

42.4

Associated Gene:

Gene:

EFHC2

Ensembl Gene ID:

ENSAPLG00000012158

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045869

122421227 - 122470616

49390

ENSAPLT00000045116

122421227 - 122470616

49390

ENSAPLT00000012680

122419827 - 122470616

50790