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Intron Name: Anas_platyrhynchos_platyrhynchos_1_122430633_122435515_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

122430633 - 122435515

Intron Length:

4883

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGTAAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

TTTTACTTAAAC

Flanking Amino Acid:

HTKVIAYEPFRNLIVSITDG

Intron Amino Acid Position:

588

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.9

71.6

40.1

Major BPS

77.9

0.69

0.8

75.9

Major PPT

77.2

0.61

74.1

39.5

Minor 5ss

31.3

-2.1

3.1

38.3

46.6

Minor BPS

75.5

0.78

1.5

85.19

32.4

Associated Gene:

Gene:

EFHC2

Ensembl Gene ID:

ENSAPLG00000012158

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045869

122421227 - 122470616

49390

ENSAPLT00000045116

122421227 - 122470616

49390

ENSAPLT00000028663

122419763 - 122470616

50854

ENSAPLT00000012680

122419827 - 122470616

50790