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Intron Name: Anas_platyrhynchos_platyrhynchos_1_122435650_122438959_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

122435650 - 122438959

Intron Length:

3310

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAAGCAG

5'SS Class:

major

3'SS Sequence:

TTCCTTTGTTAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TCTCTTTTATCT

Flanking Amino Acid:

INYMEKHANEFSVADTGFIL

Intron Amino Acid Position:

544

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

58.9

41.6

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

72.6

0.51

1.1

78.5

33.8

Minor 5ss

-3

3.1

28.6

43.8

Minor BPS

60.7

0.41

1.6

76.38

40.7

Associated Gene:

Gene:

EFHC2

Ensembl Gene ID:

ENSAPLG00000012158

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045116

122421227 - 122470616

49390

ENSAPLT00000028663

122419763 - 122470616

50854

ENSAPLT00000012680

122419827 - 122470616

50790

ENSAPLT00000045869

122421227 - 122470616

49390