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Intron Name: Anas_platyrhynchos_platyrhynchos_1_122453996_122455139_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

122453996 - 122455139

Intron Length:

1144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAAT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTCCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAA

U12 Branch Point Sequence:

CATTTGTTAACA

Flanking Amino Acid:

LFLRRDKLPKYAPTGLYQPG

Intron Amino Acid Position:

292

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.5

0.8

87.7

27.9

Major BPS

72.1

0.55

1.2

63.7

43.9

Major PPT

85.7

0.8

0.7

80.4

24.9

Minor 5ss

33.9

-1.8

3.3

47.8

47.9

Minor BPS

60.4

0.32

2.1

71.72

40.6

Associated Gene:

Gene:

EFHC2

Ensembl Gene ID:

ENSAPLG00000012158

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012680

122419827 - 122470616

50790

ENSAPLT00000045869

122421227 - 122470616

49390

ENSAPLT00000045116

122421227 - 122470616

49390

ENSAPLT00000028663

122419763 - 122470616

50854