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Intron Name: Anas_platyrhynchos_platyrhynchos_1_122466426_122470427_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

122466426 - 122470427

Intron Length:

4002

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TGGTTTGATCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

ACTTGCGTAATG

Flanking Amino Acid:

APAWVAFDKQALQILRPLEQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.1

1.11

0.7

89.8

22.5

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

66.4

0.37

58.9

46.4

Minor 5ss

-1.6

2.6

43.5

43.6

Minor BPS

46.9

-0.3

2.4

56.92

45.3

Associated Gene:

Gene:

EFHC2

Ensembl Gene ID:

ENSAPLG00000012158

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012680

122419827 - 122470616

50790

ENSAPLT00000045116

122421227 - 122470616

49390

ENSAPLT00000028663

122419763 - 122470616

50854