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Intron Name: Anas_platyrhynchos_platyrhynchos_1_122503359_122509459_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

122503359 - 122509459

Intron Length:

6101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTATGTAGA

5'SS Class:

major

3'SS Sequence:

TTTATTTTCCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

TTAACTTCAACT

Flanking Amino Acid:

AVGGGFLLLQIASHSGYVQV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

73.4

37.3

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

83.1

0.74

0.8

77.2

36.9

Minor 5ss

42.9

-0.8

2.5

50.7

40.2

Minor BPS

66.7

0.6

1.6

82.22

38.8

Associated Gene:

Gene:

FUNDC1

Ensembl Gene ID:

ENSAPLG00000012067

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029864

122500743 - 122513277

12535

ENSAPLT00000012550

122502547 - 122513277

10731