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Intron Name: Anas_platyrhynchos_platyrhynchos_1_122509536_122511381_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

122509536 - 122511381

Intron Length:

1846

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGAGAA

5'SS Class:

major

3'SS Sequence:

TTGTTCTCCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

CTTCATTGGACT

Flanking Amino Acid:

TQIVMGGVTGWCAGFLFQKV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

0.9

69.2

30.2

Major BPS

78.6

0.71

79.6

32.9

Major PPT

71.2

0.48

32.9

Minor 5ss

24.4

-2.9

3.1

25.9

38.1

Minor BPS

49.3

0.03

1.7

70.32

40.6

Associated Gene:

Gene:

FUNDC1

Ensembl Gene ID:

ENSAPLG00000012067

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029864

122500743 - 122513277

12535

ENSAPLT00000012550

122502547 - 122513277

10731