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Intron Name: Anas_platyrhynchos_platyrhynchos_1_122585320_122597655_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

122585320 - 122597655

Intron Length:

12336

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTCTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

AATTCAATACTT

Flanking Amino Acid:

FNLLLEDYPKALSAYQRYYS

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

25.6

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

91.8

0.94

0.6

87.6

22.9

Minor 5ss

35.3

-1.7

3.2

50.4

Minor BPS

47.3

-0.1

2.1

70.04

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027576

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035604

122509990 - 122648675

138686

ENSAPLT00000029539

122553369 - 122649151

95783