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Intron Name: Anas_platyrhynchos_platyrhynchos_1_122597706_122623099_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

122597706 - 122623099

Intron Length:

25394

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCTGTATA

5'SS Class:

major

3'SS Sequence:

TTTTCTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTCTTTTACA

Flanking Amino Acid:

YYSLQSDYWKNAAFLYGLGL

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.3

79.7

35.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

95.6

1.03

0.5

91.4

20.1

Minor 5ss

40.8

-1

2.6

51.4

45.1

Minor BPS

77.6

0.86

1.5

87.29

30.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027576

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035604

122509990 - 122648675

138686

ENSAPLT00000029539

122553369 - 122649151

95783