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Intron Name: Anas_platyrhynchos_platyrhynchos_1_122623159_122632678_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

122623159 - 122632678

Intron Length:

9520

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TACTTTTTATCT

Flanking Amino Acid:

LVYFHYNAFQWAIKAFQEAL

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

68.8

42.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

80.3

0.68

0.8

77.9

36.6

Minor 5ss

32.2

-2

3.1

37.3

42.5

Minor BPS

62.6

0.47

1.6

76.08

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027576

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035604

122509990 - 122648675

138686

ENSAPLT00000029539

122553369 - 122649151

95783