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Intron Name: Anas_platyrhynchos_platyrhynchos_1_122632800_122642763_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

122632800 - 122642763

Intron Length:

9964

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

GTTGTTTGAAAA

Flanking Amino Acid:

VNTDYESSLKHFQLALIDCN

Intron Amino Acid Position:

219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

84.1

30.2

Major BPS

71.6

0.54

33.1

Major PPT

92.9

0.97

0.7

92.3

26.6

Minor 5ss

42.4

-0.8

3.1

57.6

47.1

Minor BPS

49.4

-0

1.6

61.64

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027576

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035604

122509990 - 122648675

138686

ENSAPLT00000029539

122553369 - 122649151

95783