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Intron Name: Anas_platyrhynchos_platyrhynchos_1_122642819_122645092_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

122642819 - 122645092

Intron Length:

2274

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

CTCCCTCTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

ATAATTTTGATT

Flanking Amino Acid:

CNPCTLSNAEIQFHIAHLYE

Intron Amino Acid Position:

237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

84.2

26.3

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

81.6

0.71

0.7

75.3

26.8

Minor 5ss

37.7

-1.4

2.7

46.1

36.1

Minor BPS

57.4

0.32

1.2

69.67

35.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027576

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035604

122509990 - 122648675

138686

ENSAPLT00000029539

122553369 - 122649151

95783