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Intron Name: Anas_platyrhynchos_platyrhynchos_1_122662734_122665637_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

122662734 - 122665637

Intron Length:

2904

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTGCCTTAC

5'SS Class:

weak_major

3'SS Sequence:

CCTTCCTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAG

U12 Branch Point Sequence:

CTGAGATTAACT

Flanking Amino Acid:

HITESGSNGNGLHKGQSSHL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.2

0.05

1.4

56.5

39.7

Major BPS

67.2

0.43

1.5

77.4

37.3

Major PPT

81.4

0.71

0.7

76.6

25.4

Minor 5ss

40.9

-1

50.3

40.3

Minor BPS

49.3

0.03

2.1

69.67

46.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011033

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011571

122662443 - 122699811

37369