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Intron Name: Anas_platyrhynchos_platyrhynchos_1_122684261_122686640_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

122684261 - 122686640

Intron Length:

2380

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTCCA

5'SS Class:

strong_major

3'SS Sequence:

TTGTATTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

ATTTTCACAATT

Flanking Amino Acid:

QASSFQESLREENEKKSHHK

Intron Amino Acid Position:

504

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

67.6

39.4

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

81.5

0.71

0.8

76.7

37.2

Minor 5ss

28.6

-2.5

2.7

25.4

36.3

Minor BPS

57.5

0.31

1.8

79.42

36.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011033

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011571

122662443 - 122699811

37369