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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_122735243_122735901_R

Intron Information:

Intron Rank:
4
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
122735243 - 122735901
Intron Length:
659

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTACTCAGC
5'SS Class:
major
3'SS Sequence:
TGGTCTTTAACAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTTCAT
U12 Branch Point Sequence:
TGGTCTTTAACA
Flanking Amino Acid:
STLGIIDKEEGSQLIDGQQE
Intron Amino Acid Position:
319

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
69.1
0.45
1.1
60.1
44.8
Major BPS
100
1.24
0.5
100
0
Major PPT
73.9
0.54
1
69.5
40.5
Minor 5ss
38.7
-1.3
3.1
52.7
44
Minor BPS
79.4
0.92
1.1
79.95
36.2

Associated Gene:

Gene:
DIPK2B
Ensembl Gene ID:
ENSAPLG00000010917
Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000011366
122734608 - 122745543
10936