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Intron Name: Anas_platyrhynchos_platyrhynchos_1_122737760_122741745_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
122737760 - 122741745

Intron Length:
3986

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTCAGTGCC

5'SS Class:
strong_major

3'SS Sequence:
GCTCCCTCTCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AAATAAA

U12 Branch Point Sequence:
GGAAAATAAACG

Flanking Amino Acid:
AKRLTPDLVQGLSSPMLRCP

Intron Amino Acid Position:
165

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80.1
0.71
1.2
76.7
33.6

Major BPS
62
0.3
1
62.3
30.4

Major PPT
75.4
0.57
0.8
65.5
36.1

Minor 5ss
29.4
-2.4
2.9
36.5
40.5

Minor BPS
40.2
-0.8
2
41.46
41.8

Associated Gene:

Gene:
DIPK2B

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

122734608 - 122745543
10936