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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12279715_12280770_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

12279715 - 12280770

Intron Length:

1056

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAA

U12 Branch Point Sequence:

CTCTCCTTCACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

75.9

35.2

Major BPS

69.8

0.49

70.3

31.8

Major PPT

80.6

0.69

0.7

75.1

Minor 5ss

38.8

-1.3

2.9

45.4

43.9

Minor BPS

0.56

1.8

74.7

43.3

Associated Gene:

Gene:

LRRC17

Ensembl Gene ID:

ENSAPLG00000012106

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042851

12279533 - 12300786

21254