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Intron Name: Anas_platyrhynchos_platyrhynchos_1_122972607_122973347_R

Intron Information:

Intron Rank:

146809

Intron Class:

major

Intron Phase:

Intron Coordinates:

122972607 - 122973347

Intron Length:

741

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTAAA

5'SS Class:

strong_major

3'SS Sequence:

GTCTGCATTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGAAAT

U12 Branch Point Sequence:

TGGGTCTGCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

26.2

Major BPS

59.4

0.23

1.2

65.3

38.6

Major PPT

72.8

0.51

62.5

43.1

Minor 5ss

41.1

-1

2.5

50.4

46.1

Minor BPS

44.6

-0.3

1.9

60.5

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026319

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040675

122972521 - 122975523

3003

ENSAPLT00000025394

122971519 - 122973415

1897