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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12297508_12298730_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12297508 - 12298730

Intron Length:

1223

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAATA

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTTGATTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TTCATATTAATA

Flanking Amino Acid:

NSNGIAYIDPAAFSGLNNLE

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

82.6

29.6

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

65.4

0.35

39.7

Minor 5ss

37.2

-1.4

46.4

Minor BPS

58.7

0.27

1.6

68.65

37.9

Associated Gene:

Gene:

LRRC17

Ensembl Gene ID:

ENSAPLG00000012106

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012596

12280771 - 12299137

18367

ENSAPLT00000042851

12279533 - 12300786

21254