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Intron Name: Anas_platyrhynchos_platyrhynchos_1_123168112_123170444_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123168112 - 123170444

Intron Length:

2333

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

TTTATTTTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

TTTTTCTTAAAA

Flanking Amino Acid:

QTNGDNRKLNSPV*

Intron Amino Acid Position:

309

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

84.2

33.6

Major BPS

82.2

0.8

71.9

35.8

Major PPT

87.9

0.85

0.7

83.6

31.3

Minor 5ss

44.6

-0.6

2.9

70.4

39.5

Minor BPS

82.2

1.01

1.2

88.42

27.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010902

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018408

123159906 - 123170936

11031

ENSAPLT00000017475

123164362 - 123170936

6575

ENSAPLT00000011350

123162649 - 123170936

8288