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Intron Name: Anas_platyrhynchos_platyrhynchos_1_123189090_123210483_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

123189090 - 123210483

Intron Length:

21394

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTGCTTTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

GCACATTTCACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.8

76.5

26.8

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

85.1

0.79

0.7

81.1

30.9

Minor 5ss

24.3

-3

3.1

28.7

43.6

Minor BPS

46.1

-0.2

1.9

59.9

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011309

123185989 - 123219927

33939