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Intron Name: Anas_platyrhynchos_platyrhynchos_1_123227793_123228124_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123227793 - 123228124

Intron Length:

332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGTATG

5'SS Class:

major

3'SS Sequence:

CCTTTTGTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAATCAT

U12 Branch Point Sequence:

ATTCTTGCAATT

Flanking Amino Acid:

KDFHKAGKPIGLCCISPVLA

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

74.4

41.9

Major BPS

62.7

0.32

1.3

40.9

Major PPT

84.6

0.78

0.8

79.6

32.3

Minor 5ss

-0.5

2.5

51.3

45.4

Minor BPS

45.7

-0.2

2.1

67.22

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018842

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019896

123226890 - 123232665

5776