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Intron Name: Anas_platyrhynchos_platyrhynchos_1_123229958_123230737_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123229958 - 123230737

Intron Length:

780

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTAAGTTGC

5'SS Class:

major

3'SS Sequence:

TCTGTTTTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

CACGTTTTATCT

Flanking Amino Acid:

YDGTEIHEASAILVHLSRGG

Intron Amino Acid Position:

106

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.6

0.44

1.4

64.1

43.4

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

84.5

0.78

0.7

80.6

31.5

Minor 5ss

41.5

-0.9

2.8

48.1

41.3

Minor BPS

47.9

-0

1.7

59.41

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018842

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019896

123226890 - 123232665

5776