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Intron Name: Anas_platyrhynchos_platyrhynchos_1_123243907_123243945_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

123243907 - 123243945

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTAAA

5'SS Class:

major

3'SS Sequence:

CATGGAAAATGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

GGTTTGTAAATT

Flanking Amino Acid:

TGDWIAFGCSGISWAYKSEV

Intron Amino Acid Position:

347

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.1

77.1

32.8

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

41.5

-0.4

1.7

38.4

42.4

Minor 5ss

37.5

-1.4

2.4

42.6

44.3

Minor BPS

47.5

-0.1

2.3

68.54

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010371

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010860

123234872 - 123250865

15994