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Intron Name: Anas_platyrhynchos_platyrhynchos_1_123244789_123245974_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123244789 - 123245974

Intron Length:

1186

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTGATGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

ATTTCTTTGATG

Flanking Amino Acid:

REKVKYSRVAKYFFNKEGDF

Intron Amino Acid Position:

275

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.2

26.3

Major BPS

0.85

0.9

39.9

Major PPT

69.9

0.45

61.7

43.6

Minor 5ss

36.1

-1.6

3.3

49.4

41.3

Minor BPS

71.9

0.54

1.2

72.25

34.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010371

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010860

123234872 - 123250865

15994