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Intron Name: Anas_platyrhynchos_platyrhynchos_1_123254171_123255460_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123254171 - 123255460

Intron Length:

1290

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

TTTTTCCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATAAC

U12 Branch Point Sequence:

TTTTCCTTACAG

Flanking Amino Acid:

TYEFQVENFFTLYHVKTEIF

Intron Amino Acid Position:

1012

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

79.2

33.9

Major BPS

62.7

0.32

1.2

39.8

Major PPT

93.4

0.98

0.6

88.4

21.4

Minor 5ss

40.9

-1

2.8

58.9

39.3

Minor BPS

68.9

0.46

1.8

76.73

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010086

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010539

123251681 - 123289222

37542