Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_123256435_123256902_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123256435 - 123256902

Intron Length:

468

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAATGTAC

5'SS Class:

major

3'SS Sequence:

ACATGTTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

ATTAAACAAACT

Flanking Amino Acid:

AKHSLLSAGKRKYVQVCIQN

Intron Amino Acid Position:

912

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

63.2

37.8

Major BPS

73.8

0.59

0.9

26.8

Major PPT

76.9

0.61

0.9

73.2

41.2

Minor 5ss

37.6

-1.4

3.3

50.6

46.1

Minor BPS

-0.5

2.2

66.67

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010086

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010539

123251681 - 123289222

37542