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Intron Name: Anas_platyrhynchos_platyrhynchos_1_123310001_123310479_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123310001 - 123310479

Intron Length:

479

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTTTTAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTGTTTTAAAG

Flanking Amino Acid:

ILAFLGFVGAASFGVRRLIG

Intron Amino Acid Position:

348

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

78.8

29.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

73.9

0.54

1.1

74.5

39.3

Minor 5ss

32.9

-2

2.9

40.3

45.4

Minor BPS

56.2

0.06

1.6

60.52

41.6

Associated Gene:

Gene:

AGPAT3

Ensembl Gene ID:

ENSAPLG00000009814

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044187

123309761 - 123355515

45755

ENSAPLT00000010248

123309761 - 123355922

46162