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Intron Name: Anas_platyrhynchos_platyrhynchos_1_123324808_123355192_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

123324808 - 123355192

Intron Length:

30385

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

CCAGGCTCAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

81.6

33.2

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

94.1

0.99

0.5

92.8

16.8

Minor 5ss

43.4

-0.7

3.2

57.2

46.9

Minor BPS

44.6

-0.3

56.17

46.6

Associated Gene:

Gene:

AGPAT3

Ensembl Gene ID:

ENSAPLG00000009814

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044187

123309761 - 123355515

45755

ENSAPLT00000010248

123309761 - 123355922

46162