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Intron Name: Anas_platyrhynchos_platyrhynchos_1_123355273_123355801_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

123355273 - 123355801

Intron Length:

529

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

ACCTTTTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTATTATTGACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

73.4

37.3

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

85.1

0.79

0.8

80.1

31.2

Minor 5ss

-1.9

2.9

37.5

41.1

Minor BPS

64.7

0.45

1.6

75.39

34.6

Associated Gene:

Gene:

AGPAT3

Ensembl Gene ID:

ENSAPLG00000009814

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010248

123309761 - 123355922

46162