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Intron Name: Anas_platyrhynchos_platyrhynchos_1_123452561_123453064_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123452561 - 123453064

Intron Length:

504

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGGAG

5'SS Class:

strong_major

3'SS Sequence:

TGTTAATGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TTTACTACAACC

Flanking Amino Acid:

WTHKHPNNLKVACEKTVSAM

Intron Amino Acid Position:

256

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

65.7

40.1

Major BPS

84.4

0.85

34.5

Major PPT

72.5

0.51

1.1

66.3

Minor 5ss

34.7

-1.7

3.5

45.4

49.7

Minor BPS

54.6

0.12

1.9

72.67

37.9

Associated Gene:

Gene:

PDXK

Ensembl Gene ID:

ENSAPLG00000004480

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045748

123451645 - 123489660

38016

ENSAPLT00000004627

123451640 - 123492321

40682