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Intron Name: Anas_platyrhynchos_platyrhynchos_1_123453202_123454395_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123453202 - 123454395

Intron Length:

1194

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

GTCTGTATTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTAAC

U12 Branch Point Sequence:

TGTTACCTAACT

Flanking Amino Acid:

YLIALGSHRKTHADGTNMTQ

Intron Amino Acid Position:

210

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

34.8

Major BPS

63.2

0.33

63.6

30.5

Major PPT

72.3

0.5

0.9

66.3

39.5

Minor 5ss

42.3

-0.9

2.8

52.9

38.3

Minor BPS

66.5

0.6

1.9

87.19

37.5

Associated Gene:

Gene:

PDXK

Ensembl Gene ID:

ENSAPLG00000004480

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045748

123451645 - 123489660

38016

ENSAPLT00000004627

123451640 - 123492321

40682