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Intron Name: Anas_platyrhynchos_platyrhynchos_1_123454508_123457190_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

123454508 - 123457190

Intron Length:

2683

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

TGCACATGGGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CACTGAT

U12 Branch Point Sequence:

CCTTTTTGCACA

Flanking Amino Acid:

KIHTEKDALEVMDMLHAMGP

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.8

38.5

Major BPS

71.2

0.53

37.5

Major PPT

47.5

-0.1

1.2

44.9

40.6

Minor 5ss

35.1

-1.7

2.7

42.5

44.3

Minor BPS

47.4

-0.2

1.9

58.67

41.9

Associated Gene:

Gene:

PDXK

Ensembl Gene ID:

ENSAPLG00000004480

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045748

123451645 - 123489660

38016

ENSAPLT00000004627

123451640 - 123492321

40682