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Intron Name: Anas_platyrhynchos_platyrhynchos_1_123458136_123459820_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123458136 - 123459820

Intron Length:

1685

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTTAGTACT

5'SS Class:

major

3'SS Sequence:

TTTTCTTCCATAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTCAA

U12 Branch Point Sequence:

TTTTCTTCCATA

Flanking Amino Acid:

GDKWNGEGSMYVPKDLLPVY

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

78.3

35.5

Major BPS

70.6

0.51

73.3

31.3

Major PPT

0.77

0.6

80.7

24.7

Minor 5ss

34.9

-1.7

2.6

42.8

37.6

Minor BPS

0.21

1.9

75.09

37.1

Associated Gene:

Gene:

PDXK

Ensembl Gene ID:

ENSAPLG00000004480

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004627

123451640 - 123492321

40682

ENSAPLT00000045748

123451645 - 123489660

38016