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Intron Name: Anas_platyrhynchos_platyrhynchos_1_123461769_123464629_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123461769 - 123464629

Intron Length:

2861

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCACAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TTAACTTTAAAA

Flanking Amino Acid:

KVNQYDYVLTGYTRDTSFLA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

73.4

37.3

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

0.52

75.6

32.3

Minor 5ss

38.9

-1.2

2.8

49.3

46.5

Minor BPS

68.1

0.57

1.4

74.56

36.3

Associated Gene:

Gene:

PDXK

Ensembl Gene ID:

ENSAPLG00000004480

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045748

123451645 - 123489660

38016

ENSAPLT00000004627

123451640 - 123492321

40682