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Intron Name: Anas_platyrhynchos_platyrhynchos_1_123464735_123471577_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123464735 - 123471577

Intron Length:

6843

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAATAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATGAT

U12 Branch Point Sequence:

TAGCCCTTGAAA

Flanking Amino Acid:

VNSVQFSNHTGYAHWKGQVL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

80.1

28.2

Major BPS

0.45

57.8

Major PPT

95.8

1.03

0.5

92.1

18.3

Minor 5ss

-1.2

3.2

55.7

48.5

Minor BPS

61.1

0.34

1.5

66.24

39.6

Associated Gene:

Gene:

PDXK

Ensembl Gene ID:

ENSAPLG00000004480

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045748

123451645 - 123489660

38016

ENSAPLT00000004627

123451640 - 123492321

40682