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Intron Name: Anas_platyrhynchos_platyrhynchos_1_123488275_123489485_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

123488275 - 123489485

Intron Length:

1211

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTTTGTGCT

5'SS Class:

major

3'SS Sequence:

CATTGCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGCCAT

U12 Branch Point Sequence:

TTTCTAGGAAAA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.4

0.39

1.2

63.6

40.8

Major BPS

62.2

0.3

1.4

72.5

43.5

Major PPT

80.8

0.69

0.9

36.8

Minor 5ss

37.3

-1.4

43.4

43.7

Minor BPS

41.6

-0.6

2.2

60.16

Associated Gene:

Gene:

PDXK

Ensembl Gene ID:

ENSAPLG00000004480

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045748

123451645 - 123489660

38016