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Intron Name: Anas_platyrhynchos_platyrhynchos_1_123508993_123509758_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123508993 - 123509758

Intron Length:

766

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCGG

5'SS Class:

strong_major

3'SS Sequence:

CCTCTTGGAGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAC

U12 Branch Point Sequence:

TCCTCTTGGAGC

Flanking Amino Acid:

LEKNNLEKVKDSGKDEKEAS

Intron Amino Acid Position:

374

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

64.3

47.1

Major BPS

72.3

0.55

1.2

77.4

37.4

Major PPT

64.8

0.33

1.1

61.3

38.8

Minor 5ss

30.2

-2.3

3.2

38.6

46.5

Minor BPS

48.1

-0.1

1.8

57.53

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004310

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004460

123504449 - 123523168

18720