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Intron Name: Anas_platyrhynchos_platyrhynchos_1_123537524_123539218_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123537524 - 123539218

Intron Length:

1695

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTCTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAG

U12 Branch Point Sequence:

TGTTCTCTCACA

Flanking Amino Acid:

FVLALAGIVTNVAALACGRE

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

0.9

76.5

27.6

Major BPS

72.5

0.56

1.5

71.7

44.6

Major PPT

81.9

0.72

0.8

76.3

32.3

Minor 5ss

36.7

-1.5

2.8

41.8

38.8

Minor BPS

54.3

0.13

2.1

72.69

39.3

Associated Gene:

Gene:

HSF2BP

Ensembl Gene ID:

ENSAPLG00000004231

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004333

123522801 - 123551798

28998