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Intron Name: Anas_platyrhynchos_platyrhynchos_1_123539337_123543730_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

123539337 - 123543730

Intron Length:

4394

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTATGGTGA

5'SS Class:

weak_major

3'SS Sequence:

CTTTCCATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TCCCTTTCCATT

Flanking Amino Acid:

MKPGLCTKFKVLMLMSLYNV

Intron Amino Acid Position:

233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.5

0.23

1.2

52.2

41.3

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

84.6

0.78

0.8

81.8

28.5

Minor 5ss

44.2

-0.6

3.1

55.2

Minor BPS

-0.4

1.8

56.05

41.5

Associated Gene:

Gene:

HSF2BP

Ensembl Gene ID:

ENSAPLG00000004231

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004333

123522801 - 123551798

28998