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Intron Name: Anas_platyrhynchos_platyrhynchos_1_123617886_123620405_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123617886 - 123620405

Intron Length:

2520

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGGT

5'SS Class:

strong_major

3'SS Sequence:

TGTGTCTCGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAA

U12 Branch Point Sequence:

ATTTCTTTAAGC

Flanking Amino Acid:

NHPHIIKLYQVMETKDMLYI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.9

35.3

Major BPS

74.7

0.61

65.9

40.9

Major PPT

70.1

0.45

65.3

41.2

Minor 5ss

32.2

-2

3.5

47.6

47.9

Minor BPS

73.7

0.72

1.5

80.43

34.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004813

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005000

123616876 - 123627341

10466

ENSAPLT00000040796

123617421 - 123627341

9921