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Intron Name: Anas_platyrhynchos_platyrhynchos_1_123620470_123620649_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123620470 - 123620649

Intron Length:

180

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTGGTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TGCTTCTAAATT

Flanking Amino Acid:

TEFAKNGEMFDHLTSNGHLS

Intron Amino Acid Position:

112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.5

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

83.4

0.75

0.9

77.3

Minor 5ss

40.3

-1.1

3.1

56.2

42.2

Minor BPS

62.1

0.46

1.7

75.64

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004813

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040796

123617421 - 123627341

9921

ENSAPLT00000005000

123616876 - 123627341

10466