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Intron Name: Anas_platyrhynchos_platyrhynchos_1_123621449_123622461_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123621449 - 123622461

Intron Length:

1013

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCTTTTT

5'SS Class:

major

3'SS Sequence:

CTTTGTCATCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

ATGAGTTTATCT

Flanking Amino Acid:

RFRIPYFMSEDCETLIRRML

Intron Amino Acid Position:

249

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

76.9

34.3

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

78.3

0.64

0.9

40.6

Minor 5ss

39.7

-1.2

3.2

58.4

46.1

Minor BPS

47.7

-0

66.57

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004813

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040796

123617421 - 123627341

9921

ENSAPLT00000005000

123616876 - 123627341

10466