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Intron Name: Anas_platyrhynchos_platyrhynchos_1_123622686_123622921_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123622686 - 123622921

Intron Length:

236

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

TGATGTCTTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAA

U12 Branch Point Sequence:

GTTCCTTTGATG

Flanking Amino Acid:

LGIDRQRTVESLQNSSYNHF

Intron Amino Acid Position:

324

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.8

35.2

Major BPS

77.9

0.69

0.8

77.9

25.8

Major PPT

71.6

0.49

0.9

62.7

Minor 5ss

28.4

-2.5

2.8

34.6

41.3

Minor BPS

62.9

0.26

1.3

64.52

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004813

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040796

123617421 - 123627341

9921

ENSAPLT00000005000

123616876 - 123627341

10466