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Intron Name: Anas_platyrhynchos_platyrhynchos_1_123623072_123623684_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123623072 - 123623684

Intron Length:

613

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGCCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTGCAT

U12 Branch Point Sequence:

TTCTCTGCATCT

Flanking Amino Acid:

PRSSEISSGEMPQDSLTSET

Intron Amino Acid Position:

374

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

74.7

Major BPS

62.4

0.31

1.4

73.6

41.8

Major PPT

80.6

0.69

0.8

77.2

31.5

Minor 5ss

26.2

-2.7

2.9

29.6

43.4

Minor BPS

45.9

-0.2

2.4

71.47

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004813

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040796

123617421 - 123627341

9921

ENSAPLT00000005000

123616876 - 123627341

10466