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Intron Name: Anas_platyrhynchos_platyrhynchos_1_123624279_123624970_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123624279 - 123624970

Intron Length:

692

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

TTCCCCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGGGAA

U12 Branch Point Sequence:

ATCTTGGGAATG

Flanking Amino Acid:

TTHFYQHAPPCIVISSSASP

Intron Amino Acid Position:

490

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

34.8

Major BPS

48.8

-0

1.5

49.1

46.3

Major PPT

82.4

0.73

0.7

76.9

25.1

Minor 5ss

37.5

-1.4

2.8

41.7

Minor BPS

-1

2.5

45.32

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004813

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040796

123617421 - 123627341

9921

ENSAPLT00000005000

123616876 - 123627341

10466