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Intron Name: Anas_platyrhynchos_platyrhynchos_1_123742435_123742809_F

Intron Information:

Intron Rank:

130858

Intron Class:

major

Intron Phase:

Intron Coordinates:

123742435 - 123742809

Intron Length:

375

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGACTGCA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATGAA

U12 Branch Point Sequence:

TTTTTTTTTAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

1.1

71.1

34.7

Major BPS

58.9

0.22

49.8

35.1

Major PPT

88.4

0.86

0.9

94.6

18.5

Minor 5ss

33.1

-1.9

3.1

41.6

Minor BPS

56.3

0.05

1.8

67.7

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020263

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045946

123722874 - 123742972

20099

ENSAPLT00000044534

123735117 - 123742972

7856